CDS

Accession Number TCMCG006C27701
gbkey CDS
Protein Id XP_022548939.1
Location complement(join(4758178..4760064,4760147..4760234,4760361..4760473,4760576..4760707,4760806..4760989,4761086..4761219,4761298..4761402,4761525..4761626,4761726..4761818,4761927..4762244,4762339..4762440,4762532..4762594,4762671..4763193,4763290..4763444,4763518..4764033,4764122..4764163,4764249..4764380,4764501..4764568,4764647..4764985,4765181..4765253,4765648..4765740,4766521..4766582,4766711..4766771))
Gene LOC106370880
GeneID 106370880
Organism Brassica napus

Protein

Length 1794aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022693218.1
Definition protein TSS isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Translation initiation factor eIF3 subunit 135
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K03255        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCTCCCAAGAGCAACCGTGGAAAGACAAAAGGAGACAAGAAGAAGAAGGAAGAGAAAGTTCTTCCGGTTATGGTGGATGTCATTGTGAACCTTCCGGACGAGACGGAGGCTATTTTGAAGGGCATATCAACGGACAGGATCATAGATGTTCGTCGGCTTTTATCCGTTAACTTCGACACCTGCCATGTTACCAACTATTCTCTCTCCCATGAGGTAAGAGGATCGCAGTTAAAAGACACAGTGGATGTTTCGGCGCTTAAGCCGTGTGTTCTCACGTTAACAGAAGAGGATTACAATGAGGGAACCGCGATGGCGCACGTTAGACGGCTGCTTGACGTCGTCGCCTGTACTACTTGCTTCGGTCCGTCGCCGGAGAAATCCGATTCGGTGAAAAATGCGCAGGTTAAGGGAGGTGGAAAGAATCCCAAACAGACTGAAACGTCGCCTCCGCCGTCTCCTGCGCCGAAGGATGCGGTTGTTGATGAAGCCGGAGAGACTAGTCACTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCCTAAGCTCGGAAGCTTCTATGAGTTCTTCTCTCTCGCTCACCTCACTCCTCCTCTTCAATATATAAGGCTCGTGGCGAAGCGGGAAACTGAAGATATCGCGGCGGAAGATCATCTTCTCTCCGTCGATGTGAAGCTTTGTAACGGGAAGCTCGTTCATGTCGAAGGCTGCAGAAAAGGATTCTACAGCATCGGGAAACAAAGAATCATATGTCACAATCTTGTTGATTTGCTTAGACAAATCAGTAGAGCCTTCGATAATGCTTACAGTGATCTTCTGAAAGCATTTTCGGAGCGCAACAAGTTTGGGAATCTTCCTTACGGGTTTAGAGCAAACACATGGCTCATCCCGCCTTCTGCAGCGCAGTCACCAGCAGCGTTTCCGCCTCTCCCTGTCGAGGATGAGAGATGGGGAGGGGATGGTGGTGGTCAAGGAAGAGACGGCAGCTACGATTTGGTTCCATGGGCCAACGAATTCGCCTTTATCGCATCCATGCCTTGCAAAACAGCAGAGGAGAGGCAACTTAGAGACAGAAAAGTGTTTCTCCTTCACAACCTTTTCGTTGATGTCGCCACTTTCAGAGCCATCAAGGCTGTTCAGAAAGTAATGGCTGACCCAGTTCTGGCTGAAGACTCTCAAGTGCTGTATTCCGAGACAGTTGGAGATTTGAGTGTTACGGTTACGAGGGATACTTCCAATGCAAGTAGCAAAGTGGATACCAAAATCGACGGAATTCAAGCTACTGGTTTGGATAAAACGAAGCTGATGGAACGGAACCTTCTCAAGGGACTTACAGCTGATGAGAACACTGCTGCTCATGATGTTGCTACTTTAGGAACTATAAGCCTTAAGTATTGTGGTTACATTTCTGTTGTCAAAATAGAGAAGGAGAATGAGAAGTTAAGCCCACCTTCTCAAATTGTTGACCTCCTTGAACAGCCTGAAGGTGGTGCTAATGCTCTAAACATCAACAGTTTGAGATTCCTTCTCCATAAATCCTCTCCTGAGCAGAACAAGAAAACACATCAGCAACAGGATGATGAGCTTACATCTTCACGAGAATTTGTAAGTATAATGCTGGAGGAAAGTCTTGTTAAGCTGGAGGAAGAAGAGATAGACAGGGATAGTATCATGAGGTGGGAACTTGGAGCCTGTTGGATACAGCATTTACAAGATCAAAAGAATACCGAAAAGGACAAAAAACAAACCAACGAAAAGTCTAAGAATGAACTGAAGGTTGAAGGGCTTGGGAAGCCGCTTAAGTCTCTCAACAGCAACAAGAAAAAAACAGACGCAAGCAGCCCTAAGGCGCAGCAGACTGCACTATCGTCTCAGGTTGATTCGGCTTCTTCAGAGGCTGATAATGCTGCAATAACTGCAACTTTGCAATCTGACGCCGAGAAGAATGCTCAAGAAAATGTGCTTGTCCTGAAGAATTTGTTGTCTGAAGCAGCCTTCACTCGCCTACAAGAGTCAGATACTGGACTTCATGACAAGTCGTTGCAAGAACTTGTCGACTTGGCACAAAAGTATTATACTGAAGTCGCTATTCCGAAGCTGGTTGCAGATTTTGGTTCGTTGGAACTCTCCCCAGTTGATGGCCGGACTCTAACTGATTTTATGCACACAAGAGGTCTTCGGATGCGCTCTTTAGGATATGTCGTTAAGCTCTCAGATAAGTTGTCACATGTACAGTCTCTGTGTGTTCATGAGATGATTGTTAGAGCCCTTAAGCATATTCTTCAGGCGGTGATTTCTGCTGTTGCTGCTGACACTGACAAAATAGCTGCAAAAGTAGCTACTGCTCTGAACATGATGCTTGGGATTCCAAAAACTGAAGCGGAAAACTCTTGGAATGTACATCCTCTTATCTTCCGGTGGTTGGAGAAATTCTTGAAGAAACGATATGACTACGATCTCAATGCCTTCAGTTACAAGGATCTACGAAAGTTTGCCATTCTCCGTGGATTATGCCATAAGGTTGGTATTGAGTTGATTCCAAGGGATTTTGACATGGAGTCCCCAGAACCGTTCCAAAAAACAGATGTGGTCAGTCTGGTCCCAGTGCATAAGCAAGCAGCATGTTCGTCTGCTGATGGAAGACAACTTCTGGAGTCATCTAAAACAGCCTTAGACAAAGGAAAGCTTGAAGATGCAGTTACATATGGAACAAAGGCTCTTGCTAAGCTTGTAGCAGTTTGTGGTCCGTATCACAGAATGACAGCCGGAGCTTACAGTTTACTTGCTGTAGTTCTATATCACACTGGTGACTTTAACCAGGCTACTATATATCAGCAAAAGGCGTTAGATATCAATGAGAGGGAACTTGGACTTGATCATCCGGATACAATGAAGAGTTATGGTGATCTTGCTGTCTTCTATTATAGGCTTCAGCATACAGAGCTGGCTCTCAAGTATGTTAAGCGTGCGTTGTATCTCTTACATCTAACATGTGGTCCATCTCATCCGAACACTGCTGCTACATACATCAATGTAGCCATGATGGAGGAAGGTCTAGGAAATGTACATGTTGCCTTGAGGTATCTTCACAAAGCTCTCAAGTGTAATCAAAGGTTGCTTGGTCCTGATCATATCCAGACTGCTGCAAGCTACCATGCCATAGCCATTGCGCTCTCGTTGATGGAAGCATACCATTTAAGTGTTCAGCATGAGCAAACAACCTTAAGAATCCTCCGAGCAAAGCTGGGCCCAGATGATTTGCGTACTCAGGATGCTGCTGCTTGGCTAGAATACTTTGAGTCCAAGGCTTTTGAACAACAGGAAGCTGCAAGAAATGGTACTCCTAAGCCTGACGCGTCTATAGCCAGCAAAGGCCACCTAAGTGTATCCGATCTACTGGACTTTATCAACCCAAGCCATAACGCAAAAGGGAAACAGAGTGTGGCAGCAAAGAGGAAGAGCTATATGAAGCTAAAGGAAAAATCCAATCAGAACGTTGTTTCTGAACAGTTAACAGAAACCCCAAGGGAAAATCAAAAGGAAATGTCTGAAGAGGAGACAGAAGCAACTGGATCAGAAAATGGTCAATCGAGCGATGCGAATCAGGAGACAATTCTTGCTCCAGCTGAAGAACCACCTTCACATCCAGTCATTGACGAGGCTATTATGGATAATAGTAATCCAATTACATCTGCTGAAGTTTCAACTGAGACACAACACCCTGATGGTAGTGAAGATGGATGGCAACCGGTGCATAGACCGAGATCTGCTGGATCATATGGTCGCCGGTTGAAGCAACGACGAGCATCAGTTGGAAAGGTATATACATATCAGAAGAAAAATGTTGAAGCTGATAACGATAACCCTGTTCTCCAGAATGCTACTCAGCCGAACGCCACATACTACGTTGTGAAGAAGCGTACAGCGTCCTATGCAAACTATGGAGATCATCATTCTCCCGGTATGACAACTCAAGGCACCAAATCTGGCAGGAAGGTTAAAACCTTGGCATATCGGGTTAAATCAACGCCGTCTTCTGATAACCCCAAAACTTCAGCTGAAACATCAGAAGAAGATGGGTTGAAGACGGATGCTTCTCCTGCTGTGCCATCTGGTCTGTCTAGTAATGTGCAAAATGAGGCATACCCGAAATCCTCTGTTGTAAGTCTTGGAAAATCTCCATCCTACAAGGAAGTAGCATTGGCACCACCTGGCTCCATTGCCAAGTATCAAGTCTGGGCTCCACAAGCCGAAGCTTCAGATAAGCAAGAGGAGAAAAAATCTGAAGAGGGCACATCGGTGGAGCTGACAAGGGATGAGCAGATGATTACAGTGTCAGAGAAAGAGGTGAAAAATGAAATTTCTGCGGACGCAGAGTCTAGCAAACCTCAAGGCAAAGAAGAGATCGAAGTAGAGTTACAATCATCTGAAGTGGAATTCAAAGGGAACAATTTGAACGGAAATGAAGAATCTGGTGGGGGCATTCAGGTGGAAGAACCAGTACTTGATGAAGCTAACGAAGGTGTAACAGATATGATTCATTCCACCACAGAGCAAGAAGTGAAAGATCAGCTGGCTGCTGATTCAGATGATCTGAAGGAAAAACTGGGAATCTCTGCTACAGACTCGAGCGACGCCCCGCGAGAGTTACTGTTACCTAACAAGAAGCTATCAGCTTCAGCTGTTCCATTCAACCCGTCATCACCTCCAAGTATCATACGTCCTACTCCCATAGGCATGAACATTGGACCGTCGTGGCCAGTGAACATGACTCTTCATCACGGACCTGGTCCTTTCCCTTCACCTCCTACAACTCCAAACTTGATGCAGTCAATGTCCTTTGTATACCCTCCTCCTTACACTCAATCAGTCCCCACAAGTACCTATCCTGTAACCAGTGGTCCTTTCCATCCCAATCAGTTCCCATGGCCGCATATGTCGGAGTTTGTACCAAGAACGGTTTGGCCCGGATGCCATCCCGTTGAGTTTCCCCCTCCACACATGATCGCTCCCGAGCCAATAGCTTCAACTGTCTTAGAGCCAACTGTGATTCTACCAACTGATATTGACACTTCAGGTGTGGAAGAAGGCAAGCAAGTTGCGGCGGCAACCGCGGGTGAAACTATGGATTCTGTTAATCATGTGAATGCAGTGGCTAGCAGTGAAATGGAGAACGGAAACAAGAAGTTTGAGGATGGCGAGAAGACGTTTAGCATTTTGTTAAGAGGAAGGAGAAACAGGAAACAGACACTGAGAATGCCGATCAGTTTGCTTAACAGGCCTTATGATTCTCAACCGTTCAAGATTGCTTATAGCAGAGTCATCAGAGGCAGCGAGGCTCCCAAGTCCGCAGCTTGA
Protein:  
MAPKSNRGKTKGDKKKKEEKVLPVMVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEVRGSQLKDTVDVSALKPCVLTLTEEDYNEGTAMAHVRRLLDVVACTTCFGPSPEKSDSVKNAQVKGGGKNPKQTETSPPPSPAPKDAVVDEAGETSHSXXXXXXXXXXXXXXXXXXFPKLGSFYEFFSLAHLTPPLQYIRLVAKRETEDIAAEDHLLSVDVKLCNGKLVHVEGCRKGFYSIGKQRIICHNLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLIPPSAAQSPAAFPPLPVEDERWGGDGGGQGRDGSYDLVPWANEFAFIASMPCKTAEERQLRDRKVFLLHNLFVDVATFRAIKAVQKVMADPVLAEDSQVLYSETVGDLSVTVTRDTSNASSKVDTKIDGIQATGLDKTKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYISVVKIEKENEKLSPPSQIVDLLEQPEGGANALNINSLRFLLHKSSPEQNKKTHQQQDDELTSSREFVSIMLEESLVKLEEEEIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTNEKSKNELKVEGLGKPLKSLNSNKKKTDASSPKAQQTALSSQVDSASSEADNAAITATLQSDAEKNAQENVLVLKNLLSEAAFTRLQESDTGLHDKSLQELVDLAQKYYTEVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGYVVKLSDKLSHVQSLCVHEMIVRALKHILQAVISAVAADTDKIAAKVATALNMMLGIPKTEAENSWNVHPLIFRWLEKFLKKRYDYDLNAFSYKDLRKFAILRGLCHKVGIELIPRDFDMESPEPFQKTDVVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYHLSVQHEQTTLRILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTPKPDASIASKGHLSVSDLLDFINPSHNAKGKQSVAAKRKSYMKLKEKSNQNVVSEQLTETPRENQKEMSEEETEATGSENGQSSDANQETILAPAEEPPSHPVIDEAIMDNSNPITSAEVSTETQHPDGSEDGWQPVHRPRSAGSYGRRLKQRRASVGKVYTYQKKNVEADNDNPVLQNATQPNATYYVVKKRTASYANYGDHHSPGMTTQGTKSGRKVKTLAYRVKSTPSSDNPKTSAETSEEDGLKTDASPAVPSGLSSNVQNEAYPKSSVVSLGKSPSYKEVALAPPGSIAKYQVWAPQAEASDKQEEKKSEEGTSVELTRDEQMITVSEKEVKNEISADAESSKPQGKEEIEVELQSSEVEFKGNNLNGNEESGGGIQVEEPVLDEANEGVTDMIHSTTEQEVKDQLAADSDDLKEKLGISATDSSDAPRELLLPNKKLSASAVPFNPSSPPSIIRPTPIGMNIGPSWPVNMTLHHGPGPFPSPPTTPNLMQSMSFVYPPPYTQSVPTSTYPVTSGPFHPNQFPWPHMSEFVPRTVWPGCHPVEFPPPHMIAPEPIASTVLEPTVILPTDIDTSGVEEGKQVAAATAGETMDSVNHVNAVASSEMENGNKKFEDGEKTFSILLRGRRNRKQTLRMPISLLNRPYDSQPFKIAYSRVIRGSEAPKSAA